Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GAP43P17677 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GAP43P17677 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GAP43P17677 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GAP43P17677 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GAP43P17677 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.21■■□□□ 1.15
GAP43P17677 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.21■■□□□ 1.15
GAP43P17677 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.21■■□□□ 1.15
GAP43P17677 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 KRT8P20-201ENST00000423953 1409 ntBASIC22.21■■□□□ 1.15
GAP43P17677 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
GAP43P17677 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.21■■□□□ 1.15
GAP43P17677 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GAP43P17677 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
GAP43P17677 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
GAP43P17677 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
GAP43P17677 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
GAP43P17677 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
GAP43P17677 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
GAP43P17677 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.2■■□□□ 1.14
GAP43P17677 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 ID1-201ENST00000376105 1233 ntBASIC22.2■■□□□ 1.14
GAP43P17677 HLA-L-209ENST00000420110 1011 ntBASIC22.2■■□□□ 1.14
GAP43P17677 AC097658.1-201ENST00000475555 843 ntBASIC22.2■■□□□ 1.14
GAP43P17677 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.2■■□□□ 1.14
GAP43P17677 MYC-209ENST00000641252 345 ntBASIC22.2■■□□□ 1.14
GAP43P17677 AC133041.1-202ENST00000642053 222 ntBASIC22.2■■□□□ 1.14
GAP43P17677 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
GAP43P17677 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
GAP43P17677 BX119927.1-201ENST00000636596 1552 ntBASIC22.2■■□□□ 1.14
GAP43P17677 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.2■■□□□ 1.14
GAP43P17677 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.2■■□□□ 1.14
GAP43P17677 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
GAP43P17677 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GAP43P17677 HLA-G-202ENST00000376815 851 ntBASIC22.19■■□□□ 1.14
GAP43P17677 HLA-G-203ENST00000376818 1127 ntBASIC22.19■■□□□ 1.14
GAP43P17677 AC069152.1-201ENST00000438030 544 ntBASIC22.19■■□□□ 1.14
GAP43P17677 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.19■■□□□ 1.14
GAP43P17677 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.19■■□□□ 1.14
GAP43P17677 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.19■■□□□ 1.14
GAP43P17677 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
GAP43P17677 AC098934.4-201ENST00000564127 592 ntBASIC22.19■■□□□ 1.14
GAP43P17677 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.19■■□□□ 1.14
GAP43P17677 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GAP43P17677 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GAP43P17677 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.19■■□□□ 1.14
GAP43P17677 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.19■■□□□ 1.14
GAP43P17677 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.19■■□□□ 1.14
GAP43P17677 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.19■■□□□ 1.14
GAP43P17677 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
GAP43P17677 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
GAP43P17677 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GAP43P17677 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
GAP43P17677 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.18■■□□□ 1.14
GAP43P17677 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.18■■□□□ 1.14
GAP43P17677 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.18■■□□□ 1.14
GAP43P17677 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
GAP43P17677 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.18■■□□□ 1.14
GAP43P17677 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GAP43P17677 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.18■■□□□ 1.14
GAP43P17677 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.18■■□□□ 1.14
GAP43P17677 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.18■■□□□ 1.14
GAP43P17677 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
GAP43P17677 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
GAP43P17677 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GAP43P17677 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.18■■□□□ 1.14
GAP43P17677 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
GAP43P17677 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
GAP43P17677 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.18■■□□□ 1.14
GAP43P17677 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
GAP43P17677 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
GAP43P17677 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.17■■□□□ 1.14
GAP43P17677 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
GAP43P17677 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
GAP43P17677 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAP43P17677 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms