Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL4AP11441 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL4AP11441 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBL4AP11441 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.58■□□□□ 0.56
UBL4AP11441 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UBL4AP11441 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
UBL4AP11441 RAP2CP1-201ENST00000605103 478 ntBASIC18.58■□□□□ 0.56
UBL4AP11441 AC092666.2-201ENST00000613287 246 ntBASIC18.58■□□□□ 0.56
UBL4AP11441 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
UBL4AP11441 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL4AP11441 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
UBL4AP11441 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL4AP11441 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
UBL4AP11441 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL4AP11441 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.58■□□□□ 0.56
UBL4AP11441 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBL4AP11441 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.57■□□□□ 0.56
UBL4AP11441 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.57■□□□□ 0.56
UBL4AP11441 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
UBL4AP11441 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.57■□□□□ 0.56
UBL4AP11441 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBL4AP11441 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.57■□□□□ 0.56
UBL4AP11441 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UBL4AP11441 AC133552.2-202ENST00000575694 574 ntBASIC18.57■□□□□ 0.56
UBL4AP11441 CYP2T3P-201ENST00000601990 817 ntBASIC18.57■□□□□ 0.56
UBL4AP11441 AC010980.2-201ENST00000587099 1412 ntBASIC18.57■□□□□ 0.56
UBL4AP11441 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
UBL4AP11441 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
UBL4AP11441 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
UBL4AP11441 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.56■□□□□ 0.56
UBL4AP11441 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UBL4AP11441 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 KRT18P68-201ENST00000392293 1000 ntBASIC18.56■□□□□ 0.56
UBL4AP11441 AL512625.2-201ENST00000417533 625 ntBASIC18.56■□□□□ 0.56
UBL4AP11441 AC093787.1-201ENST00000450396 207 ntBASIC18.56■□□□□ 0.56
UBL4AP11441 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.56■□□□□ 0.56
UBL4AP11441 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.56■□□□□ 0.56
UBL4AP11441 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 AC105020.6-201ENST00000621523 1217 ntBASIC18.56■□□□□ 0.56
UBL4AP11441 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UBL4AP11441 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.56■□□□□ 0.56
UBL4AP11441 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBL4AP11441 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
UBL4AP11441 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.56■□□□□ 0.56
UBL4AP11441 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBL4AP11441 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
UBL4AP11441 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.55■□□□□ 0.56
UBL4AP11441 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 AL050303.2-201ENST00000619798 666 ntBASIC18.55■□□□□ 0.56
UBL4AP11441 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.55■□□□□ 0.56
UBL4AP11441 AL512408.1-201ENST00000569378 2000 ntBASIC18.55■□□□□ 0.56
UBL4AP11441 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
UBL4AP11441 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UBL4AP11441 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBL4AP11441 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.55■□□□□ 0.56
UBL4AP11441 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UBL4AP11441 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UBL4AP11441 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.54■□□□□ 0.56
UBL4AP11441 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms