Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBCP0CG48 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.61■□□□□ 0.41
UBCP0CG48 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.61■□□□□ 0.41
UBCP0CG48 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.61■□□□□ 0.41
UBCP0CG48 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 KRT19P1-201ENST00000405746 1186 ntBASIC17.61■□□□□ 0.41
UBCP0CG48 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UBCP0CG48 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.61■□□□□ 0.41
UBCP0CG48 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.61■□□□□ 0.41
UBCP0CG48 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.61■□□□□ 0.41
UBCP0CG48 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UBCP0CG48 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.61■□□□□ 0.41
UBCP0CG48 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBCP0CG48 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.61■□□□□ 0.41
UBCP0CG48 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.61■□□□□ 0.41
UBCP0CG48 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
UBCP0CG48 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.61■□□□□ 0.41
UBCP0CG48 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
UBCP0CG48 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UBCP0CG48 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
UBCP0CG48 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.6■□□□□ 0.41
UBCP0CG48 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.6■□□□□ 0.41
UBCP0CG48 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.6■□□□□ 0.41
UBCP0CG48 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.6■□□□□ 0.41
UBCP0CG48 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBCP0CG48 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
UBCP0CG48 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.59■□□□□ 0.41
UBCP0CG48 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.59■□□□□ 0.41
UBCP0CG48 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
UBCP0CG48 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.59■□□□□ 0.41
UBCP0CG48 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UBCP0CG48 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.59■□□□□ 0.41
UBCP0CG48 MIR638-201ENST00000385237 100 ntBASIC17.59■□□□□ 0.41
UBCP0CG48 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.59■□□□□ 0.41
UBCP0CG48 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBCP0CG48 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
UBCP0CG48 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
UBCP0CG48 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
UBCP0CG48 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.59■□□□□ 0.41
UBCP0CG48 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBCP0CG48 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
UBCP0CG48 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.58■□□□□ 0.41
UBCP0CG48 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
UBCP0CG48 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBCP0CG48 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBCP0CG48 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBCP0CG48 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.58■□□□□ 0.4
UBCP0CG48 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.58■□□□□ 0.4
UBCP0CG48 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.58■□□□□ 0.4
UBCP0CG48 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.58■□□□□ 0.4
UBCP0CG48 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.58■□□□□ 0.4
UBCP0CG48 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.58■□□□□ 0.4
UBCP0CG48 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
UBCP0CG48 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBCP0CG48 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.58■□□□□ 0.4
UBCP0CG48 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 BX119927.1-201ENST00000636596 1552 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms