Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.86■■□□□ 1.25
HOXC6P09630 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HOXC6P09630 AC004264.1-201ENST00000608354 794 ntBASIC22.86■■□□□ 1.25
HOXC6P09630 REXO1L10P-201ENST00000615707 1290 ntBASIC22.86■■□□□ 1.25
HOXC6P09630 MIR6786-201ENST00000616843 113 ntBASIC22.86■■□□□ 1.25
HOXC6P09630 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.86■■□□□ 1.25
HOXC6P09630 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.86■■□□□ 1.25
HOXC6P09630 MIR2861-201ENST00000636310 90 ntBASIC22.86■■□□□ 1.25
HOXC6P09630 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HOXC6P09630 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HOXC6P09630 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.86■■□□□ 1.25
HOXC6P09630 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
HOXC6P09630 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.85■■□□□ 1.25
HOXC6P09630 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.85■■□□□ 1.25
HOXC6P09630 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
HOXC6P09630 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.85■■□□□ 1.25
HOXC6P09630 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.85■■□□□ 1.25
HOXC6P09630 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HOXC6P09630 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 KRT8P9-201ENST00000558927 1449 ntBASIC22.84■■□□□ 1.25
HOXC6P09630 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 UNC93B2-201ENST00000285383 730 ntBASIC22.84■■□□□ 1.25
HOXC6P09630 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
HOXC6P09630 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.84■■□□□ 1.25
HOXC6P09630 AC005363.2-201ENST00000618631 242 ntBASIC22.84■■□□□ 1.25
HOXC6P09630 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.84■■□□□ 1.25
HOXC6P09630 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HOXC6P09630 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
HOXC6P09630 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.84■■□□□ 1.25
HOXC6P09630 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
HOXC6P09630 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
HOXC6P09630 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HOXC6P09630 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HOXC6P09630 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.83■■□□□ 1.25
HOXC6P09630 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HOXC6P09630 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.83■■□□□ 1.25
HOXC6P09630 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.83■■□□□ 1.25
HOXC6P09630 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.83■■□□□ 1.25
HOXC6P09630 AL590326.2-201ENST00000625139 305 ntBASIC22.83■■□□□ 1.25
HOXC6P09630 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.83■■□□□ 1.25
HOXC6P09630 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
HOXC6P09630 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
HOXC6P09630 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
HOXC6P09630 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
HOXC6P09630 AC079834.2-201ENST00000609776 1949 ntBASIC22.82■■□□□ 1.24
HOXC6P09630 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
HOXC6P09630 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
HOXC6P09630 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.82■■□□□ 1.24
HOXC6P09630 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.82■■□□□ 1.24
HOXC6P09630 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.82■■□□□ 1.24
HOXC6P09630 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.82■■□□□ 1.24
HOXC6P09630 AP002982.1-201ENST00000492365 877 ntBASIC22.82■■□□□ 1.24
HOXC6P09630 AP000525.1-201ENST00000608286 694 ntBASIC22.82■■□□□ 1.24
HOXC6P09630 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.82■■□□□ 1.24
HOXC6P09630 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HOXC6P09630 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.82■■□□□ 1.24
HOXC6P09630 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.82■■□□□ 1.24
HOXC6P09630 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.81■■□□□ 1.24
HOXC6P09630 FBXW4P1-201ENST00000426721 2239 ntBASIC22.81■■□□□ 1.24
HOXC6P09630 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
HOXC6P09630 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
HOXC6P09630 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.81■■□□□ 1.24
HOXC6P09630 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HOXC6P09630 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
HOXC6P09630 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.81■■□□□ 1.24
HOXC6P09630 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.81■■□□□ 1.24
HOXC6P09630 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.81■■□□□ 1.24
HOXC6P09630 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
HOXC6P09630 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HOXC6P09630 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HOXC6P09630 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.81■■□□□ 1.24
HOXC6P09630 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HOXC6P09630 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms