Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CNOT4O95628 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.85■□□□□ 0.45
CNOT4O95628 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.85■□□□□ 0.45
CNOT4O95628 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CNOT4O95628 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 UNC93B5-201ENST00000530315 699 ntBASIC17.85■□□□□ 0.45
CNOT4O95628 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.85■□□□□ 0.45
CNOT4O95628 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
CNOT4O95628 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.84■□□□□ 0.45
CNOT4O95628 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT4O95628 ESRRAP1-201ENST00000400596 1257 ntBASIC17.84■□□□□ 0.45
CNOT4O95628 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.84■□□□□ 0.45
CNOT4O95628 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CNOT4O95628 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT4O95628 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.84■□□□□ 0.45
CNOT4O95628 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT4O95628 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CNOT4O95628 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT4O95628 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CNOT4O95628 AC092368.3-202ENST00000574180 1591 ntBASIC17.83■□□□□ 0.45
CNOT4O95628 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT4O95628 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.83■□□□□ 0.45
CNOT4O95628 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT4O95628 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT4O95628 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT4O95628 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT4O95628 AF106564.1-201ENST00000607058 2553 ntBASIC17.83■□□□□ 0.44
CNOT4O95628 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT4O95628 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT4O95628 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CNOT4O95628 AC098590.1-201ENST00000468126 897 ntBASIC17.83■□□□□ 0.44
CNOT4O95628 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT4O95628 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.83■□□□□ 0.44
CNOT4O95628 PNMA6B-201ENST00000538162 1200 ntBASIC17.83■□□□□ 0.44
CNOT4O95628 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
CNOT4O95628 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.83■□□□□ 0.44
CNOT4O95628 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.83■□□□□ 0.44
CNOT4O95628 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT4O95628 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.83■□□□□ 0.44
CNOT4O95628 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CNOT4O95628 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CNOT4O95628 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CNOT4O95628 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CNOT4O95628 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.82■□□□□ 0.44
CNOT4O95628 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT4O95628 AC023632.3-201ENST00000521633 145 ntBASIC17.82■□□□□ 0.44
CNOT4O95628 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT4O95628 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNOT4O95628 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.82■□□□□ 0.44
CNOT4O95628 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CNOT4O95628 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT4O95628 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.81■□□□□ 0.44
CNOT4O95628 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.81■□□□□ 0.44
CNOT4O95628 GCSHP5-201ENST00000443090 522 ntBASIC17.81■□□□□ 0.44
CNOT4O95628 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.81■□□□□ 0.44
CNOT4O95628 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT4O95628 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CNOT4O95628 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.81■□□□□ 0.44
CNOT4O95628 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNOT4O95628 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms