Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SIX6O95475 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 AL117332.1-201ENST00000622628 974 ntBASIC16.82■□□□□ 0.28
SIX6O95475 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX6O95475 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
SIX6O95475 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SIX6O95475 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX6O95475 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SIX6O95475 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SIX6O95475 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SIX6O95475 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX6O95475 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.81■□□□□ 0.28
SIX6O95475 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX6O95475 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SIX6O95475 MTDHP2-201ENST00000601468 714 ntBASIC16.81■□□□□ 0.28
SIX6O95475 AC092028.1-203ENST00000608262 953 ntBASIC16.81■□□□□ 0.28
SIX6O95475 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX6O95475 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX6O95475 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.8■□□□□ 0.28
SIX6O95475 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 AC090340.1-201ENST00000620778 4980 ntBASIC16.8■□□□□ 0.28
SIX6O95475 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.8■□□□□ 0.28
SIX6O95475 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.8■□□□□ 0.28
SIX6O95475 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SIX6O95475 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.8■□□□□ 0.28
SIX6O95475 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.8■□□□□ 0.28
SIX6O95475 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX6O95475 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.79■□□□□ 0.28
SIX6O95475 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SIX6O95475 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.79■□□□□ 0.28
SIX6O95475 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.79■□□□□ 0.28
SIX6O95475 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SIX6O95475 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SIX6O95475 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 BX664725.1-201ENST00000438252 379 ntBASIC16.79■□□□□ 0.28
SIX6O95475 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.79■□□□□ 0.28
SIX6O95475 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.79■□□□□ 0.28
SIX6O95475 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SIX6O95475 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 AL138781.2-201ENST00000617896 1843 ntBASIC16.79■□□□□ 0.28
SIX6O95475 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SIX6O95475 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.79■□□□□ 0.28
SIX6O95475 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX6O95475 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX6O95475 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.78■□□□□ 0.28
SIX6O95475 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
SIX6O95475 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SIX6O95475 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.78■□□□□ 0.28
SIX6O95475 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SIX6O95475 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX6O95475 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX6O95475 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SIX6O95475 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms