Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC026471.6-201ENST00000622954 1905 ntBASIC9.06□□□□□ -0.96
USH2AO75445 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
USH2AO75445 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
USH2AO75445 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC9.06□□□□□ -0.96
USH2AO75445 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 KRT18P38-201ENST00000449496 1282 ntBASIC9.06□□□□□ -0.96
USH2AO75445 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC9.06□□□□□ -0.96
USH2AO75445 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC9.06□□□□□ -0.96
USH2AO75445 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC9.06□□□□□ -0.96
USH2AO75445 AC008622.2-201ENST00000617006 1229 ntBASIC9.06□□□□□ -0.96
USH2AO75445 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC9.06□□□□□ -0.96
USH2AO75445 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC9.06□□□□□ -0.96
USH2AO75445 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC9.06□□□□□ -0.96
USH2AO75445 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USH2AO75445 AC068473.5-201ENST00000616428 2072 ntBASIC9.05□□□□□ -0.96
USH2AO75445 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 TREX2-204ENST00000370212 861 ntTSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC9.05□□□□□ -0.96
USH2AO75445 SDHD-206ENST00000528182 754 ntTSL 3 BASIC9.05□□□□□ -0.96
USH2AO75445 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 EED-207ENST00000528180 1745 ntTSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 AC087742.1-201ENST00000575880 1738 ntBASIC9.05□□□□□ -0.96
USH2AO75445 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC9.05□□□□□ -0.96
USH2AO75445 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC9.05□□□□□ -0.96
USH2AO75445 GRAMD4P8-201ENST00000605465 1115 ntBASIC9.05□□□□□ -0.96
USH2AO75445 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC9.05□□□□□ -0.96
USH2AO75445 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 FDX2-206ENST00000492239 773 ntTSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 C2orf69P3-201ENST00000565542 1120 ntBASIC9.05□□□□□ -0.96
USH2AO75445 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 AL732292.2-201ENST00000609649 430 ntBASIC9.05□□□□□ -0.96
USH2AO75445 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC9.05□□□□□ -0.96
USH2AO75445 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
USH2AO75445 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC9.05□□□□□ -0.96
USH2AO75445 FSCN1P1-201ENST00000568912 1481 ntBASIC9.04□□□□□ -0.96
USH2AO75445 AC116050.2-201ENST00000612102 1779 ntBASIC9.04□□□□□ -0.96
USH2AO75445 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
USH2AO75445 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
USH2AO75445 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC9.04□□□□□ -0.96
USH2AO75445 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC9.04□□□□□ -0.96
USH2AO75445 SLC25A1P2-201ENST00000430693 912 ntBASIC9.04□□□□□ -0.96
USH2AO75445 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC9.04□□□□□ -0.96
USH2AO75445 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC9.04□□□□□ -0.96
USH2AO75445 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
USH2AO75445 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC9.04□□□□□ -0.96
USH2AO75445 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
USH2AO75445 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
USH2AO75445 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
USH2AO75445 STK25-205ENST00000405883 1904 ntTSL 2 BASIC9.04□□□□□ -0.96
USH2AO75445 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
USH2AO75445 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
USH2AO75445 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC9.04□□□□□ -0.96
USH2AO75445 ATP5G2P1-201ENST00000433580 426 ntBASIC9.04□□□□□ -0.96
USH2AO75445 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC9.04□□□□□ -0.96
USH2AO75445 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC9.04□□□□□ -0.96
USH2AO75445 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
USH2AO75445 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms