Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.43■□□□□ 0.86
RIPK2O43353 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RIPK2O43353 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK2O43353 PBX2P1-201ENST00000493219 1291 ntBASIC20.43■□□□□ 0.86
RIPK2O43353 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK2O43353 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK2O43353 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK2O43353 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK2O43353 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RIPK2O43353 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.43■□□□□ 0.86
RIPK2O43353 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK2O43353 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.43■□□□□ 0.86
RIPK2O43353 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK2O43353 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
RIPK2O43353 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK2O43353 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK2O43353 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK2O43353 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
RIPK2O43353 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK2O43353 MIR939-201ENST00000401314 82 ntBASIC20.42■□□□□ 0.86
RIPK2O43353 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK2O43353 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 SLC7A5P2-201ENST00000553010 536 ntBASIC20.42■□□□□ 0.86
RIPK2O43353 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.42■□□□□ 0.86
RIPK2O43353 AL355001.2-201ENST00000620617 1191 ntBASIC20.42■□□□□ 0.86
RIPK2O43353 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK2O43353 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK2O43353 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.42■□□□□ 0.86
RIPK2O43353 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK2O43353 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIPK2O43353 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RIPK2O43353 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK2O43353 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK2O43353 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.41■□□□□ 0.86
RIPK2O43353 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK2O43353 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 AC106739.1-201ENST00000617035 715 ntBASIC20.41■□□□□ 0.86
RIPK2O43353 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK2O43353 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.41■□□□□ 0.86
RIPK2O43353 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
RIPK2O43353 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.41■□□□□ 0.86
RIPK2O43353 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.41■□□□□ 0.86
RIPK2O43353 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIPK2O43353 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RIPK2O43353 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
RIPK2O43353 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
RIPK2O43353 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.4■□□□□ 0.86
RIPK2O43353 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.4■□□□□ 0.86
RIPK2O43353 AC091799.1-201ENST00000422823 811 ntBASIC20.4■□□□□ 0.86
RIPK2O43353 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.4■□□□□ 0.86
RIPK2O43353 AF213884.3-201ENST00000563833 479 ntBASIC20.4■□□□□ 0.86
RIPK2O43353 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.4■□□□□ 0.86
RIPK2O43353 AC093503.3-201ENST00000624917 2352 ntBASIC20.4■□□□□ 0.86
RIPK2O43353 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK2O43353 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RIPK2O43353 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.39■□□□□ 0.86
RIPK2O43353 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.39■□□□□ 0.86
RIPK2O43353 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
RIPK2O43353 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RIPK2O43353 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RIPK2O43353 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK2O43353 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK2O43353 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.39■□□□□ 0.85
RIPK2O43353 AC096631.2-201ENST00000436136 790 ntBASIC20.39■□□□□ 0.85
RIPK2O43353 AC091305.1-201ENST00000479476 895 ntBASIC20.39■□□□□ 0.85
RIPK2O43353 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RIPK2O43353 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.39■□□□□ 0.85
RIPK2O43353 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK2O43353 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK2O43353 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK2O43353 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK2O43353 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK2O43353 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms