Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.35□□□□□ -0.11
PAX4O43316 OR10C1-204ENST00000622521 1039 ntBASIC14.35□□□□□ -0.11
PAX4O43316 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PAX4O43316 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.35□□□□□ -0.11
PAX4O43316 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PAX4O43316 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PAX4O43316 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX4O43316 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.34□□□□□ -0.11
PAX4O43316 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.34□□□□□ -0.11
PAX4O43316 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PAX4O43316 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 MCRIP2P1-201ENST00000394346 511 ntBASIC14.34□□□□□ -0.11
PAX4O43316 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.34□□□□□ -0.11
PAX4O43316 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.34□□□□□ -0.11
PAX4O43316 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.34□□□□□ -0.11
PAX4O43316 MIR2861-201ENST00000636310 90 ntBASIC14.34□□□□□ -0.11
PAX4O43316 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PAX4O43316 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
PAX4O43316 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX4O43316 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PAX4O43316 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PAX4O43316 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.33□□□□□ -0.11
PAX4O43316 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PAX4O43316 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PAX4O43316 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.33□□□□□ -0.11
PAX4O43316 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PAX4O43316 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PAX4O43316 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
PAX4O43316 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX4O43316 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 MIR663A-201ENST00000385250 93 ntBASIC14.33□□□□□ -0.12
PAX4O43316 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.33□□□□□ -0.12
PAX4O43316 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.33□□□□□ -0.12
PAX4O43316 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX4O43316 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.33□□□□□ -0.12
PAX4O43316 AC100791.3-201ENST00000617619 330 ntBASIC14.33□□□□□ -0.12
PAX4O43316 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PAX4O43316 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PAX4O43316 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.33□□□□□ -0.12
PAX4O43316 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX4O43316 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.32□□□□□ -0.12
PAX4O43316 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
PAX4O43316 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 AF201337.1-201ENST00000520239 748 ntBASIC14.32□□□□□ -0.12
PAX4O43316 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PAX4O43316 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PAX4O43316 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PAX4O43316 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX4O43316 BCL2-203ENST00000589955 5011 ntBASIC14.32□□□□□ -0.12
PAX4O43316 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX4O43316 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 CYP21A1P-202ENST00000354927 1481 ntBASIC14.31□□□□□ -0.12
PAX4O43316 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX4O43316 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms