Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PHF1O43189 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.32■□□□□ 0.36
PHF1O43189 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PHF1O43189 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PHF1O43189 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.31■□□□□ 0.36
PHF1O43189 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.31■□□□□ 0.36
PHF1O43189 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PHF1O43189 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.31■□□□□ 0.36
PHF1O43189 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.31■□□□□ 0.36
PHF1O43189 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.31■□□□□ 0.36
PHF1O43189 AC007322.4-201ENST00000509611 723 ntBASIC17.31■□□□□ 0.36
PHF1O43189 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.31■□□□□ 0.36
PHF1O43189 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.31■□□□□ 0.36
PHF1O43189 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PHF1O43189 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.31■□□□□ 0.36
PHF1O43189 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.31■□□□□ 0.36
PHF1O43189 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PHF1O43189 AL391422.3-201ENST00000603791 2761 ntBASIC17.31■□□□□ 0.36
PHF1O43189 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
PHF1O43189 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PHF1O43189 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PHF1O43189 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.31■□□□□ 0.36
PHF1O43189 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 PCDHAC2-203ENST00000615316 3011 ntBASIC17.3■□□□□ 0.36
PHF1O43189 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.3■□□□□ 0.36
PHF1O43189 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PHF1O43189 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.3■□□□□ 0.36
PHF1O43189 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.3■□□□□ 0.36
PHF1O43189 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.3■□□□□ 0.36
PHF1O43189 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.3■□□□□ 0.36
PHF1O43189 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.3■□□□□ 0.36
PHF1O43189 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.3■□□□□ 0.36
PHF1O43189 AC008694.1-202ENST00000636953 945 ntBASIC17.3■□□□□ 0.36
PHF1O43189 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHF1O43189 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PHF1O43189 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.3■□□□□ 0.36
PHF1O43189 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHF1O43189 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PHF1O43189 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PHF1O43189 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PHF1O43189 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.29■□□□□ 0.36
PHF1O43189 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PHF1O43189 AC245052.3-201ENST00000450182 901 ntBASIC17.29■□□□□ 0.36
PHF1O43189 AC128676.1-201ENST00000454392 318 ntBASIC17.29■□□□□ 0.36
PHF1O43189 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.29■□□□□ 0.36
PHF1O43189 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.29■□□□□ 0.36
PHF1O43189 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF1O43189 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 PLK5-205ENST00000642079 1969 ntBASIC17.29■□□□□ 0.36
PHF1O43189 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF1O43189 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
PHF1O43189 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PHF1O43189 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF1O43189 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHF1O43189 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.29■□□□□ 0.36
PHF1O43189 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.29■□□□□ 0.36
PHF1O43189 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHF1O43189 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.28■□□□□ 0.36
PHF1O43189 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms