Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHGDHO43175 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHGDHO43175 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
PHGDHO43175 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PHGDHO43175 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PHGDHO43175 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHGDHO43175 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PHGDHO43175 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHGDHO43175 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PHGDHO43175 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20■□□□□ 0.79
PHGDHO43175 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20■□□□□ 0.79
PHGDHO43175 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20■□□□□ 0.79
PHGDHO43175 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 AL591742.1-201ENST00000604433 565 ntBASIC20■□□□□ 0.79
PHGDHO43175 AC016405.3-201ENST00000607710 860 ntBASIC20■□□□□ 0.79
PHGDHO43175 AL356652.1-201ENST00000615962 565 ntBASIC20■□□□□ 0.79
PHGDHO43175 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20■□□□□ 0.79
PHGDHO43175 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 AC087633.2-202ENST00000565166 1439 ntBASIC20■□□□□ 0.79
PHGDHO43175 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20■□□□□ 0.79
PHGDHO43175 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20■□□□□ 0.79
PHGDHO43175 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHGDHO43175 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20■□□□□ 0.79
PHGDHO43175 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20■□□□□ 0.79
PHGDHO43175 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20■□□□□ 0.79
PHGDHO43175 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
PHGDHO43175 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHGDHO43175 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PHGDHO43175 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
PHGDHO43175 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHGDHO43175 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.99■□□□□ 0.79
PHGDHO43175 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PHGDHO43175 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
PHGDHO43175 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.99■□□□□ 0.79
PHGDHO43175 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.99■□□□□ 0.79
PHGDHO43175 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.99■□□□□ 0.79
PHGDHO43175 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.99■□□□□ 0.79
PHGDHO43175 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHGDHO43175 MIR6821-201ENST00000617625 74 ntBASIC19.99■□□□□ 0.79
PHGDHO43175 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.99■□□□□ 0.79
PHGDHO43175 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHGDHO43175 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHGDHO43175 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.99■□□□□ 0.79
PHGDHO43175 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHGDHO43175 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHGDHO43175 CYP21A1P-202ENST00000354927 1481 ntBASIC19.99■□□□□ 0.79
PHGDHO43175 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.98■□□□□ 0.79
PHGDHO43175 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.98■□□□□ 0.79
PHGDHO43175 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.98■□□□□ 0.79
PHGDHO43175 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 AL158211.5-201ENST00000623583 2518 ntBASIC19.98■□□□□ 0.79
PHGDHO43175 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.98■□□□□ 0.79
PHGDHO43175 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.98■□□□□ 0.79
PHGDHO43175 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PHGDHO43175 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 BX119927.1-201ENST00000636596 1552 ntBASIC19.98■□□□□ 0.79
PHGDHO43175 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PHGDHO43175 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
PHGDHO43175 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHGDHO43175 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PHGDHO43175 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
PHGDHO43175 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PHGDHO43175 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.97■□□□□ 0.79
PHGDHO43175 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHGDHO43175 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PHGDHO43175 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms