Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
MID1O15344 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.21■□□□□ 0.83
MID1O15344 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MID1O15344 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MID1O15344 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.2■□□□□ 0.82
MID1O15344 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MID1O15344 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
MID1O15344 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.2■□□□□ 0.82
MID1O15344 SNORA78-201ENST00000459373 127 ntBASIC20.2■□□□□ 0.82
MID1O15344 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.2■□□□□ 0.82
MID1O15344 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MID1O15344 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
MID1O15344 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MID1O15344 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MID1O15344 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.19■□□□□ 0.82
MID1O15344 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
MID1O15344 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 PRKY-204ENST00000533551 1019 ntBASIC20.19■□□□□ 0.82
MID1O15344 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.19■□□□□ 0.82
MID1O15344 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MID1O15344 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.19■□□□□ 0.82
MID1O15344 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.18■□□□□ 0.82
MID1O15344 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.18■□□□□ 0.82
MID1O15344 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MID1O15344 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
MID1O15344 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 FP700111.2-201ENST00000619190 1892 ntBASIC20.18■□□□□ 0.82
MID1O15344 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.18■□□□□ 0.82
MID1O15344 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.18■□□□□ 0.82
MID1O15344 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.18■□□□□ 0.82
MID1O15344 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.18■□□□□ 0.82
MID1O15344 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.18■□□□□ 0.82
MID1O15344 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.18■□□□□ 0.82
MID1O15344 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MID1O15344 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MID1O15344 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MID1O15344 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MID1O15344 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MID1O15344 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MID1O15344 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MID1O15344 RPS2P55-201ENST00000397318 883 ntBASIC20.17■□□□□ 0.82
MID1O15344 AC107956.1-201ENST00000494359 873 ntBASIC20.17■□□□□ 0.82
MID1O15344 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.17■□□□□ 0.82
MID1O15344 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.17■□□□□ 0.82
MID1O15344 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.17■□□□□ 0.82
MID1O15344 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MID1O15344 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MID1O15344 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 PTBP1P-201ENST00000554374 1601 ntBASIC20.16■□□□□ 0.82
MID1O15344 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.16■□□□□ 0.82
MID1O15344 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.16■□□□□ 0.82
MID1O15344 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MID1O15344 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.16■□□□□ 0.82
MID1O15344 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.16■□□□□ 0.82
MID1O15344 AC012618.2-201ENST00000428058 849 ntBASIC20.16■□□□□ 0.82
MID1O15344 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.16■□□□□ 0.82
MID1O15344 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.16■□□□□ 0.82
MID1O15344 AC233702.5-201ENST00000584107 538 ntBASIC20.16■□□□□ 0.82
MID1O15344 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.16■□□□□ 0.82
MID1O15344 AL121829.2-201ENST00000620908 328 ntBASIC20.16■□□□□ 0.82
MID1O15344 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MID1O15344 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms