Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN9O14815 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN9O14815 AC073210.2-201ENST00000430369 194 ntBASIC21.21■□□□□ 0.99
CAPN9O14815 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.21■□□□□ 0.99
CAPN9O14815 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.21■□□□□ 0.99
CAPN9O14815 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN9O14815 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.21■□□□□ 0.99
CAPN9O14815 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN9O14815 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN9O14815 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CAPN9O14815 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN9O14815 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN9O14815 AC092720.2-201ENST00000602388 1665 ntBASIC21.21■□□□□ 0.99
CAPN9O14815 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN9O14815 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CAPN9O14815 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CAPN9O14815 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.21■□□□□ 0.99
CAPN9O14815 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.99
CAPN9O14815 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CAPN9O14815 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.2■□□□□ 0.98
CAPN9O14815 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.2■□□□□ 0.98
CAPN9O14815 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.2■□□□□ 0.98
CAPN9O14815 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
CAPN9O14815 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CAPN9O14815 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.2■□□□□ 0.98
CAPN9O14815 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN9O14815 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN9O14815 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN9O14815 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CAPN9O14815 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN9O14815 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CAPN9O14815 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CAPN9O14815 C2orf69P4-201ENST00000565394 541 ntBASIC21.19■□□□□ 0.98
CAPN9O14815 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.19■□□□□ 0.98
CAPN9O14815 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN9O14815 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN9O14815 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CAPN9O14815 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CAPN9O14815 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN9O14815 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CAPN9O14815 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.18■□□□□ 0.98
CAPN9O14815 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.18■□□□□ 0.98
CAPN9O14815 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.18■□□□□ 0.98
CAPN9O14815 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CAPN9O14815 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.18■□□□□ 0.98
CAPN9O14815 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.18■□□□□ 0.98
CAPN9O14815 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN9O14815 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CAPN9O14815 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CAPN9O14815 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CAPN9O14815 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CAPN9O14815 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CAPN9O14815 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.17■□□□□ 0.98
CAPN9O14815 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.17■□□□□ 0.98
CAPN9O14815 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CAPN9O14815 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CAPN9O14815 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CAPN9O14815 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CAPN9O14815 AL157384.1-201ENST00000445995 2473 ntBASIC21.16■□□□□ 0.98
CAPN9O14815 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CAPN9O14815 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.16■□□□□ 0.98
CAPN9O14815 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN9O14815 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.16■□□□□ 0.98
CAPN9O14815 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.16■□□□□ 0.98
CAPN9O14815 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CAPN9O14815 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CAPN9O14815 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CAPN9O14815 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms