Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDLIM1O00151 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.09■□□□□ 0.65
PDLIM1O00151 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDLIM1O00151 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM1O00151 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.09■□□□□ 0.65
PDLIM1O00151 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM1O00151 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM1O00151 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.09■□□□□ 0.65
PDLIM1O00151 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM1O00151 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM1O00151 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.09■□□□□ 0.65
PDLIM1O00151 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDLIM1O00151 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDLIM1O00151 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.09■□□□□ 0.65
PDLIM1O00151 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM1O00151 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM1O00151 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.08■□□□□ 0.65
PDLIM1O00151 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM1O00151 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PDLIM1O00151 AC092720.2-201ENST00000602388 1665 ntBASIC19.08■□□□□ 0.65
PDLIM1O00151 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM1O00151 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.08■□□□□ 0.65
PDLIM1O00151 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.08■□□□□ 0.65
PDLIM1O00151 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM1O00151 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
PDLIM1O00151 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM1O00151 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM1O00151 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.08■□□□□ 0.64
PDLIM1O00151 RARRES2P6-201ENST00000567333 442 ntBASIC19.08■□□□□ 0.64
PDLIM1O00151 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.08■□□□□ 0.64
PDLIM1O00151 MIR6821-201ENST00000617625 74 ntBASIC19.08■□□□□ 0.64
PDLIM1O00151 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.08■□□□□ 0.64
PDLIM1O00151 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PDLIM1O00151 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PDLIM1O00151 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM1O00151 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM1O00151 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM1O00151 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.08■□□□□ 0.64
PDLIM1O00151 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.08■□□□□ 0.64
PDLIM1O00151 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.08■□□□□ 0.64
PDLIM1O00151 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM1O00151 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDLIM1O00151 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM1O00151 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 AC011484.1-201ENST00000377652 1995 ntBASIC19.07■□□□□ 0.64
PDLIM1O00151 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 AC097381.1-201ENST00000429019 1296 ntBASIC19.07■□□□□ 0.64
PDLIM1O00151 MIR6084-201ENST00000622012 110 ntBASIC19.07■□□□□ 0.64
PDLIM1O00151 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.07■□□□□ 0.64
PDLIM1O00151 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.07■□□□□ 0.64
PDLIM1O00151 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDLIM1O00151 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM1O00151 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PDLIM1O00151 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.06■□□□□ 0.64
PDLIM1O00151 YBX1P1-201ENST00000445822 960 ntBASIC19.06■□□□□ 0.64
PDLIM1O00151 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.06■□□□□ 0.64
PDLIM1O00151 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.06■□□□□ 0.64
PDLIM1O00151 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.06■□□□□ 0.64
PDLIM1O00151 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.06■□□□□ 0.64
PDLIM1O00151 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.06■□□□□ 0.64
PDLIM1O00151 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PDLIM1O00151 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM1O00151 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDLIM1O00151 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDLIM1O00151 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM1O00151 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDLIM1O00151 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDLIM1O00151 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms