Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL359736.2-201ENST00000621992 437 ntBASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 RPS2P4-201ENST00000476944 856 ntBASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NPIPA2E9PIF3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 UBE2SP1-201ENST00000450587 669 ntBASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 RPPH1-201ENST00000516869 333 ntBASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 AC233263.1-201ENST00000578059 224 ntBASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPA2E9PIF3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 AC069544.1-201ENST00000609399 999 ntBASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPA2E9PIF3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 AC027702.1-201ENST00000563810 1770 ntBASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.28■□□□□ 0.52
NPIPA2E9PIF3 POM121L13P-201ENST00000422362 380 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms