Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 KRT18P57-201ENST00000443599 1254 ntBASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.37■□□□□ 0.69
TRABD2BA6NFA1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 LINC01568-207ENST00000641790 1380 ntBASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 RBM17P1-201ENST00000453646 1190 ntBASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.36■□□□□ 0.69
TRABD2BA6NFA1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AC113347.1-201ENST00000413321 391 ntBASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AL353807.1-201ENST00000427475 662 ntBASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 KRT16P5-201ENST00000455284 522 ntBASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 AC026471.6-201ENST00000622954 1905 ntBASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.35■□□□□ 0.69
TRABD2BA6NFA1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 NTF6B-201ENST00000591913 560 ntBASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 AC079598.2-202ENST00000546624 1451 ntBASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRABD2BA6NFA1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.33■□□□□ 0.69
TRABD2BA6NFA1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRABD2BA6NFA1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRABD2BA6NFA1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRABD2BA6NFA1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.33■□□□□ 0.69
TRABD2BA6NFA1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRABD2BA6NFA1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.33■□□□□ 0.69
TRABD2BA6NFA1 UNC93B2-201ENST00000285383 730 ntBASIC19.33■□□□□ 0.68
TRABD2BA6NFA1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms