Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 AC097381.1-201ENST00000429019 1296 ntBASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 FAM21FP-204ENST00000608637 956 ntBASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TRAV12-3A0A0B4J271 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV12-3A0A0B4J271 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV12-3A0A0B4J271 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV12-3A0A0B4J271 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV12-3A0A0B4J271 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.96□□□□□ -0.02
TRAV12-3A0A0B4J271 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV12-3A0A0B4J271 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 RNF165-205ENST00000588679 2904 ntBASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 AC087623.3-201ENST00000607047 1098 ntBASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV12-3A0A0B4J271 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV12-3A0A0B4J271 AC137761.2-201ENST00000561729 223 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms