Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV4A0A0B4J268 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 AL512408.1-201ENST00000569378 2000 ntBASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 AL162377.1-201ENST00000618844 1793 ntBASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 AC026271.2-201ENST00000428091 497 ntBASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV4A0A0B4J268 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 MIR5787-201ENST00000611784 55 ntBASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 AC087633.2-202ENST00000565166 1439 ntBASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV4A0A0B4J268 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 MFSD11-216ENST00000590393 1141 ntBASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV4A0A0B4J268 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms