Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 TERF1P5-201ENST00000477545 1207 ntBASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-2A0A0B4J237 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV8-2A0A0B4J237 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 AC034268.1-201ENST00000441047 882 ntBASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 AC010536.3-201ENST00000620306 533 ntBASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-2A0A0B4J237 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 AC087623.3-201ENST00000607047 1098 ntBASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 MIR6821-201ENST00000617625 74 ntBASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-2A0A0B4J237 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-2A0A0B4J237 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms