Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 OR2I1P-207ENST00000453522 948 ntBASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 PVT1-219ENST00000523427 938 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 MIR4508-201ENST00000584178 70 ntBASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 AC005082.1-201ENST00000413042 2259 ntBASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 AC079598.2-202ENST00000546624 1451 ntBASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV13-2A0A0B4J235 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 Z82202.1-201ENST00000623446 1880 ntBASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 BEX3-202ENST00000372634 753 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 pRNA.6-201ENST00000610482 90 ntBASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 pRNA.5-201ENST00000612139 90 ntBASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 pRNA.11-201ENST00000618423 90 ntBASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 pRNA.13-201ENST00000619112 90 ntBASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 AC093484.2-201ENST00000580996 2166 ntBASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-2A0A0B4J235 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-2A0A0B4J235 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 ABHD17AP3-201ENST00000503096 1137 ntBASIC13.27□□□□□ -0.29
TRAV13-2A0A0B4J235 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms