Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRBV5-3A0A0A0MS03 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-3A0A0A0MS03 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 AP000974.1-201ENST00000623909 2387 ntBASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 TERF1P5-201ENST00000477545 1207 ntBASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-3A0A0A0MS03 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 AL162412.1-201ENST00000567129 965 ntBASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 AL591742.1-201ENST00000604433 565 ntBASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 AC010536.3-201ENST00000620306 533 ntBASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TRBV5-3A0A0A0MS03 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV5-3A0A0A0MS03 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.83■□□□□ 0.61
TRBV5-3A0A0A0MS03 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV5-3A0A0A0MS03 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV5-3A0A0A0MS03 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV5-3A0A0A0MS03 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV5-3A0A0A0MS03 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 AC016405.3-201ENST00000607710 860 ntBASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms