Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 UBE2CP4-201ENST00000561405 535 ntBASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SYCE2Q6PIF2 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.15□□□□□ -1.11
SYCE2Q6PIF2 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 THAP12P6-201ENST00000431978 2310 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 VEZF1P1-201ENST00000423931 1541 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 RNU1-11P-201ENST00000383975 164 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 TYMSP1-201ENST00000407851 869 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 E2F6P1-201ENST00000428850 745 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 GCNT1P5-201ENST00000449274 682 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 MRPS21P1-201ENST00000453850 223 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AL354872.1-201ENST00000456361 967 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 RPLP0P1-201ENST00000457002 361 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 SNORA35.1-201ENST00000458908 128 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 WBP1LP1-201ENST00000460451 896 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AL079303.1-201ENST00000486611 463 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AC068134.3-201ENST00000513620 788 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 FAM30C-201ENST00000561158 410 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 OR7E19P-202ENST00000589942 844 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AC010653.3-201ENST00000635332 232 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AC243725.1-201ENST00000637164 436 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AL353807.3-201ENST00000500626 2505 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 AC087501.5-201ENST00000607496 2374 ntBASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SYCE2Q6PIF2 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 OR56A4-201ENST00000330728 1209 ntBASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 U3.48-201ENST00000363172 216 ntBASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 AL137074.1-201ENST00000442640 465 ntBASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 AC013399.1-201ENST00000450311 418 ntBASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.13□□□□□ -1.11
SYCE2Q6PIF2 AL928654.1-201ENST00000476081 354 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms