Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 DDB1-203ENST00000451943 1224 ntTSL 26.72□□□□□ -1.331e-10■■□□□ 12.3
PRPF8Q6P2Q9 SNORA52-201ENST00000362915 134 ntBASIC10.37□□□□□ -0.757e-20■■□□□ 12.3
PRPF8Q6P2Q9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.09■□□□□ 0.173e-6■■□□□ 12.3
PRPF8Q6P2Q9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.413e-6■■□□□ 12.3
PRPF8Q6P2Q9 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC9.47□□□□□ -0.893e-6■■□□□ 12.3
PRPF8Q6P2Q9 RAB2A-205ENST00000466595 866 ntTSL 39.44□□□□□ -0.93e-6■■□□□ 12.3
PRPF8Q6P2Q9 RAB2A-206ENST00000481569 506 ntTSL 27.07□□□□□ -1.283e-6■■□□□ 12.3
PRPF8Q6P2Q9 SHOC2-204ENST00000480155 650 ntTSL 20.92□□□□□ -2.263e-6■■□□□ 12.3
PRPF8Q6P2Q9 RAB2A-203ENST00000429861 594 ntTSL 2-0.03□□□□□ -2.413e-6■■□□□ 12.3
PRPF8Q6P2Q9 SYNJ2BP-COX16-203ENST00000617196 580 ntAPPRIS ALT2 TSL 28.98□□□□□ -0.974e-6■■□□□ 12.3
PRPF8Q6P2Q9 SYNJ2BP-COX16-202ENST00000617124 479 ntAPPRIS ALT2 TSL 25.31□□□□□ -1.564e-6■■□□□ 12.3
PRPF8Q6P2Q9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.624e-6■■□□□ 12.3
PRPF8Q6P2Q9 SYNJ2BP-COX16-201ENST00000555276 318 ntTSL 22.99□□□□□ -1.934e-6■■□□□ 12.3
PRPF8Q6P2Q9 TLN1-205ENST00000466916 446 ntTSL 28.65□□□□□ -1.039e-7■■□□□ 12.3
PRPF8Q6P2Q9 SLC11A2-226ENST00000551231 559 ntTSL 37.23□□□□□ -1.253e-7■■□□□ 12.3
PRPF8Q6P2Q9 SLC11A2-225ENST00000551215 609 ntTSL 57.02□□□□□ -1.293e-7■■□□□ 12.3
PRPF8Q6P2Q9 SLC11A2-223ENST00000550782 3490 ntTSL 25.66□□□□□ -1.53e-7■■□□□ 12.3
PRPF8Q6P2Q9 WDR90-208ENST00000547543 1060 ntTSL 516.02■□□□□ 0.162e-6■■□□□ 12.3
PRPF8Q6P2Q9 SYMPK-218ENST00000602061 503 ntTSL 411.25□□□□□ -0.611e-15■■□□□ 12.3
PRPF8Q6P2Q9 GALT-218ENST00000554944 969 ntTSL 213.72□□□□□ -0.217e-10■■□□□ 12.3
PRPF8Q6P2Q9 GALT-203ENST00000465543 903 ntTSL 213.59□□□□□ -0.237e-10■■□□□ 12.3
PRPF8Q6P2Q9 GALT-223ENST00000556157 558 ntTSL 412.7□□□□□ -0.387e-10■■□□□ 12.3
PRPF8Q6P2Q9 GALT-208ENST00000485531 1201 ntTSL 59.62□□□□□ -0.877e-10■■□□□ 12.3
PRPF8Q6P2Q9 GALT-213ENST00000554139 858 ntTSL 58.62□□□□□ -1.037e-10■■□□□ 12.3
PRPF8Q6P2Q9 GALT-217ENST00000554897 578 ntTSL 45.92□□□□□ -1.467e-10■■□□□ 12.3
PRPF8Q6P2Q9 TM7SF2-212ENST00000528802 692 ntTSL 314.04□□□□□ -0.168e-7■■□□□ 12.3
PRPF8Q6P2Q9 TM7SF2-206ENST00000526048 1168 ntTSL 513.89□□□□□ -0.198e-7■■□□□ 12.3
PRPF8Q6P2Q9 TM7SF2-210ENST00000527968 544 ntTSL 38.53□□□□□ -1.048e-7■■□□□ 12.3
PRPF8Q6P2Q9 TAF4-203ENST00000474089 532 ntTSL 216.89■□□□□ 0.292e-7■■□□□ 12.3
PRPF8Q6P2Q9 MRPL19-207ENST00000493686 720 ntTSL 214.2□□□□□ -0.141e-6■■□□□ 12.3
PRPF8Q6P2Q9 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.19□□□□□ -0.461e-6■■□□□ 12.3
PRPF8Q6P2Q9 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.731e-6■■□□□ 12.3
PRPF8Q6P2Q9 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.031e-6■■□□□ 12.3
PRPF8Q6P2Q9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.541e-6■■□□□ 12.3
PRPF8Q6P2Q9 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC11.62□□□□□ -0.551e-6■■□□□ 12.3
PRPF8Q6P2Q9 EIF4E2-203ENST00000409167 1372 ntTSL 2 BASIC9.57□□□□□ -0.881e-6■■□□□ 12.3
PRPF8Q6P2Q9 EIF4E2-204ENST00000409322 797 ntTSL 5 BASIC9.53□□□□□ -0.881e-6■■□□□ 12.3
PRPF8Q6P2Q9 EIF4E2-206ENST00000409495 1014 ntTSL 2 BASIC8.79□□□□□ -11e-6■■□□□ 12.3
PRPF8Q6P2Q9 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC6.33□□□□□ -1.41e-6■■□□□ 12.3
PRPF8Q6P2Q9 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC5.78□□□□□ -1.481e-6■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.34■■□□□ 1.011e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.87■□□□□ 0.931e-15■■□□□ 12.3
PRPF8Q6P2Q9 FBXO31-203ENST00000563956 548 ntTSL 319.68■□□□□ 0.741e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.451e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-204ENST00000414665 876 ntTSL 217.54■□□□□ 0.41e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-207ENST00000449249 707 ntTSL 517.52■□□□□ 0.41e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.16■□□□□ 0.341e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-210ENST00000474910 629 ntTSL 216.62■□□□□ 0.251e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-211ENST00000491216 564 ntTSL 214.92□□□□□ -0.021e-15■■□□□ 12.3
PRPF8Q6P2Q9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.065e-30■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-206ENST00000437868 2033 ntTSL 1 (best)14.39□□□□□ -0.111e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-209ENST00000464098 493 ntTSL 211.8□□□□□ -0.521e-15■■□□□ 12.3
PRPF8Q6P2Q9 MBOAT7-208ENST00000453320 557 ntTSL 410.83□□□□□ -0.681e-15■■□□□ 12.3
PRPF8Q6P2Q9 FBXO31-206ENST00000569412 431 ntTSL 54.64□□□□□ -1.671e-15■■□□□ 12.3
PRPF8Q6P2Q9 SLC29A4-205ENST00000439491 805 ntTSL 313.13□□□□□ -0.311e-8■■□□□ 12.3
PRPF8Q6P2Q9 CNPY2-210ENST00000551720 586 ntTSL 316.14■□□□□ 0.172e-13■■□□□ 12.3
PRPF8Q6P2Q9 CNPY2-206ENST00000548013 817 ntTSL 1 (best)15.16■□□□□ 0.022e-13■■□□□ 12.3
PRPF8Q6P2Q9 CNPY2-211ENST00000553164 666 ntTSL 514.11□□□□□ -0.152e-13■■□□□ 12.3
PRPF8Q6P2Q9 CNPY2-202ENST00000546388 670 ntTSL 1 (best)13.87□□□□□ -0.192e-13■■□□□ 12.3
PRPF8Q6P2Q9 TNIP1-207ENST00000520695 658 ntTSL 416.38■□□□□ 0.218e-10■■□□□ 12.3
PRPF8Q6P2Q9 RBM39-215ENST00000442447 644 ntTSL 213.74□□□□□ -0.211e-10■■□□□ 12.3
PRPF8Q6P2Q9 ZNF100-205ENST00000598026 588 ntTSL 411.53□□□□□ -0.568e-10■■□□□ 12.3
PRPF8Q6P2Q9 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.32□□□□□ -0.68e-10■■□□□ 12.3
PRPF8Q6P2Q9 TNIP1-213ENST00000522100 877 ntTSL 311.16□□□□□ -0.628e-10■■□□□ 12.3
PRPF8Q6P2Q9 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.038e-10■■□□□ 12.3
PRPF8Q6P2Q9 TNIP1-209ENST00000521001 575 ntTSL 48.52□□□□□ -1.058e-10■■□□□ 12.3
PRPF8Q6P2Q9 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC6.34□□□□□ -1.398e-10■■□□□ 12.3
PRPF8Q6P2Q9 ZNF100-203ENST00000594401 548 ntTSL 45.8□□□□□ -1.488e-10■■□□□ 12.3
PRPF8Q6P2Q9 CCT7-212ENST00000482064 567 ntTSL 47.32□□□□□ -1.242e-6■■□□□ 12.3
PRPF8Q6P2Q9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.44□□□□□ -1.862e-6■■□□□ 12.3
PRPF8Q6P2Q9 DPP7-208ENST00000478597 943 ntTSL 321.35■■□□□ 1.017e-8■■□□□ 12.3
PRPF8Q6P2Q9 DPP7-212ENST00000491807 618 ntTSL 317.73■□□□□ 0.437e-8■■□□□ 12.3
PRPF8Q6P2Q9 DPP7-207ENST00000473703 684 ntTSL 314.74□□□□□ -0.057e-8■■□□□ 12.3
PRPF8Q6P2Q9 DPP7-213ENST00000497375 817 ntTSL 514.69□□□□□ -0.067e-8■■□□□ 12.3
PRPF8Q6P2Q9 PHGDH-227ENST00000641811 1031 nt14.59□□□□□ -0.071e-7■■□□□ 12.3
PRPF8Q6P2Q9 PHGDH-230ENST00000641927 1678 nt14.25□□□□□ -0.131e-7■■□□□ 12.3
PRPF8Q6P2Q9 PHGDH-214ENST00000641314 1558 nt14.17□□□□□ -0.141e-7■■□□□ 12.3
PRPF8Q6P2Q9 PHGDH-226ENST00000641756 2132 nt13.78□□□□□ -0.21e-7■■□□□ 12.3
PRPF8Q6P2Q9 HNRNPH1-237ENST00000520415 620 ntTSL 310.84□□□□□ -0.676e-26■■□□□ 12.3
PRPF8Q6P2Q9 PHGDH-201ENST00000369407 3180 ntTSL 29.17□□□□□ -0.941e-7■■□□□ 12.3
PRPF8Q6P2Q9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.631e-7■■□□□ 12.3
PRPF8Q6P2Q9 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.71e-7■■□□□ 12.3
PRPF8Q6P2Q9 RSPRY1-207ENST00000563073 699 ntTSL 35.28□□□□□ -1.564e-7■■□□□ 12.3
PRPF8Q6P2Q9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.164e-7■■□□□ 12.3
PRPF8Q6P2Q9 NGEF-206ENST00000420650 519 ntTSL 511.03□□□□□ -0.644e-10■■□□□ 12.3
PRPF8Q6P2Q9 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.77e-8■■□□□ 12.3
PRPF8Q6P2Q9 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.717e-8■■□□□ 12.3
PRPF8Q6P2Q9 SLC40A1-204ENST00000427419 299 ntTSL 1 (best)8.63□□□□□ -1.035e-6■■□□□ 12.3
PRPF8Q6P2Q9 SLC40A1-205ENST00000440626 209 ntTSL 1 (best)7.79□□□□□ -1.165e-6■■□□□ 12.3
PRPF8Q6P2Q9 CIZ1-213ENST00000471839 928 ntAPPRIS ALT2 TSL 29.23□□□□□ -0.933e-7■■□□□ 12.3
PRPF8Q6P2Q9 ECI1-202ENST00000561688 705 ntTSL 222.63■■□□□ 1.214e-7■■□□□ 12.3
PRPF8Q6P2Q9 SNORD1B-201ENST00000363091 84 ntBASIC-2.06□□□□□ -2.743e-13■■□□□ 12.3
PRPF8Q6P2Q9 HERPUD1-212ENST00000567944 435 ntTSL 21.98□□□□□ -2.094e-7■■□□□ 12.3
PRPF8Q6P2Q9 MAST2-206ENST00000477968 900 ntTSL 38.55□□□□□ -1.043e-7■■□□□ 12.3
PRPF8Q6P2Q9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.25■□□□□ 0.513e-6■■□□□ 12.3
PRPF8Q6P2Q9 BRD2-216ENST00000581002 550 ntTSL 417.2■□□□□ 0.343e-6■■□□□ 12.3
PRPF8Q6P2Q9 BRD2-217ENST00000584808 547 ntTSL 417.2■□□□□ 0.343e-6■■□□□ 12.3
PRPF8Q6P2Q9 BRD2-215ENST00000580234 718 ntTSL 415.5■□□□□ 0.073e-6■■□□□ 12.3
PRPF8Q6P2Q9 SERF2-208ENST00000409617 700 ntTSL 212.31□□□□□ -0.442e-7■■□□□ 12.3
PRPF8Q6P2Q9 SERF2-213ENST00000448830 2792 ntTSL 210.11□□□□□ -0.792e-7■■□□□ 12.3
Retrieved 100 of 73,762 protein–RNA pairs in 1130 ms