Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
UBE3AQ05086 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 RN7SKP211-201ENST00000363328 315 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE3AQ05086 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 SUMO2P8-201ENST00000434672 286 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.29□□□□□ -1.08
UBE3AQ05086 YWHABP1-201ENST00000445359 727 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 AL161454.1-201ENST00000446226 569 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 CDC42P2-201ENST00000448566 569 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE3AQ05086 AC008620.1-201ENST00000468453 592 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE3AQ05086 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE3AQ05086 SSU72P6-201ENST00000532644 488 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.29□□□□□ -1.08
UBE3AQ05086 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE3AQ05086 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.29□□□□□ -1.08
UBE3AQ05086 AC103724.4-201ENST00000605981 292 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 FKBP1AP4-201ENST00000631775 336 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 OR8A1-204ENST00000642111 1145 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.29□□□□□ -1.08
UBE3AQ05086 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.29□□□□□ -1.08
UBE3AQ05086 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.29□□□□□ -1.08
UBE3AQ05086 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.29□□□□□ -1.08
UBE3AQ05086 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
UBE3AQ05086 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC8.29□□□□□ -1.08
UBE3AQ05086 PSMC1P7-201ENST00000495689 1315 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 LINC02128-205ENST00000641755 1334 ntBASIC8.29□□□□□ -1.08
UBE3AQ05086 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
UBE3AQ05086 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.28□□□□□ -1.08
UBE3AQ05086 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.28□□□□□ -1.08
UBE3AQ05086 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
UBE3AQ05086 AC013268.3-201ENST00000262716 2324 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE3AQ05086 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.28□□□□□ -1.08
UBE3AQ05086 FAM205BP-202ENST00000399773 4009 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 YWHAZP3-201ENST00000415292 738 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 EIF3LP2-201ENST00000457262 807 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE3AQ05086 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC8.28□□□□□ -1.08
UBE3AQ05086 RNA5SP96-201ENST00000516041 107 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 OR7E87P-201ENST00000532397 929 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 NF1P12-201ENST00000549593 583 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 AC079598.4-201ENST00000549647 265 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE3AQ05086 AL589765.5-201ENST00000596133 515 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC8.28□□□□□ -1.08
UBE3AQ05086 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 AC010538.1-201ENST00000615131 663 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 AL121985.2-201ENST00000621192 555 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 AC243725.1-201ENST00000637164 436 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.28□□□□□ -1.08
UBE3AQ05086 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.28□□□□□ -1.08
UBE3AQ05086 AL162632.3-201ENST00000566976 1625 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
UBE3AQ05086 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
UBE3AQ05086 AC093616.1-201ENST00000427434 2095 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UBE3AQ05086 NF1P1-201ENST00000604105 2645 ntBASIC8.28□□□□□ -1.08
UBE3AQ05086 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
UBE3AQ05086 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.27□□□□□ -1.08
UBE3AQ05086 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.27□□□□□ -1.08
UBE3AQ05086 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.27□□□□□ -1.08
UBE3AQ05086 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.27□□□□□ -1.09
UBE3AQ05086 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.27□□□□□ -1.09
UBE3AQ05086 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.27□□□□□ -1.09
UBE3AQ05086 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE3AQ05086 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.27□□□□□ -1.09
UBE3AQ05086 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
UBE3AQ05086 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
UBE3AQ05086 SOD1P1-201ENST00000407803 440 ntBASIC8.27□□□□□ -1.09
UBE3AQ05086 PGAM1P3-201ENST00000420790 565 ntBASIC8.27□□□□□ -1.09
UBE3AQ05086 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.27□□□□□ -1.09
UBE3AQ05086 AC099344.1-201ENST00000433548 492 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms