Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TREML3P-201ENST00000457327 501 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC8.21□□□□□ -1.1
MTHFRP42898 LINC01085-203ENST00000511195 326 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.21□□□□□ -1.1
MTHFRP42898 AP000445.1-201ENST00000526692 741 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 NF1P12-201ENST00000549593 583 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.21□□□□□ -1.1
MTHFRP42898 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.21□□□□□ -1.1
MTHFRP42898 AC244090.2-201ENST00000567614 792 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 RN7SL14P-201ENST00000579715 298 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.21□□□□□ -1.1
MTHFRP42898 AC012065.3-201ENST00000602736 439 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 U1.22-201ENST00000605806 164 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC8.21□□□□□ -1.1
MTHFRP42898 AC012557.3-201ENST00000626439 255 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 AC006141.1-201ENST00000581917 2170 ntBASIC8.21□□□□□ -1.1
MTHFRP42898 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
MTHFRP42898 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.21□□□□□ -1.1
MTHFRP42898 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
MTHFRP42898 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
MTHFRP42898 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
MTHFRP42898 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 OR2A20P-201ENST00000479887 2913 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 FOLH1B-202ENST00000529567 2145 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 MAPK10-333ENST00000641607 2481 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.2□□□□□ -1.1
MTHFRP42898 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 RNA5SP448-201ENST00000363151 111 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 MIR138-2-201ENST00000384916 84 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 SLC25A5P7-201ENST00000406156 896 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.2□□□□□ -1.1
MTHFRP42898 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 PRKAR1AP1-201ENST00000441422 1162 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 PSPC1P1-201ENST00000442352 665 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 YWHABP1-201ENST00000445359 727 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 CHIAP1-201ENST00000456220 995 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 RN7SL335P-201ENST00000482790 304 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 AC093325.1-201ENST00000508378 326 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC8.2□□□□□ -1.1
MTHFRP42898 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.2□□□□□ -1.1
MTHFRP42898 MT1L-202ENST00000566367 78 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 AC011193.2-201ENST00000582638 367 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 FKBP1AP4-201ENST00000631775 336 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 FGL2-202ENST00000637771 989 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
MTHFRP42898 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.2□□□□□ -1.1
MTHFRP42898 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 PSMC1P7-201ENST00000495689 1315 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 AL049833.3-201ENST00000623920 3738 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.2□□□□□ -1.1
MTHFRP42898 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.2□□□□□ -1.1
MTHFRP42898 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 AC073324.1-201ENST00000425993 1435 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MTHFRP42898 AL353807.3-201ENST00000500626 2505 ntBASIC8.2□□□□□ -1.1
MTHFRP42898 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
MTHFRP42898 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
MTHFRP42898 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.19□□□□□ -1.1
MTHFRP42898 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
MTHFRP42898 RNA5SP389-201ENST00000362610 115 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 RNA5SP226-201ENST00000362653 115 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 RNA5SP185-201ENST00000390963 114 ntBASIC8.19□□□□□ -1.1
MTHFRP42898 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms