Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
LINC00346Q8IVM7 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
LINC00346Q8IVM7 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
LINC00346Q8IVM7 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LINC00346Q8IVM7 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LINC00346Q8IVM7 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
LINC00346Q8IVM7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 MFSD8-227ENST00000641393 4069 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 MAPK10-377ENST00000642006 2752 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC104083.1-201ENST00000569449 2615 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AP004289.1-201ENST00000436307 2205 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AKR1E2-203ENST00000345253 913 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 EIF4A1P13-201ENST00000415667 230 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 OR5M13P-201ENST00000433944 937 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 DNAJA1P6-201ENST00000437347 354 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 PPIAP28-201ENST00000458378 485 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 RN7SL505P-201ENST00000482644 293 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 RN7SL272P-201ENST00000487762 289 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC008638.2-201ENST00000503840 715 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC006499.1-201ENST00000511870 850 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 RN7SKP2-201ENST00000517003 319 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 DNM1P33-201ENST00000565222 270 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC115989.2-201ENST00000578640 563 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 MIR4682-201ENST00000580643 80 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC087645.1-201ENST00000588528 291 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AL513548.2-201ENST00000602994 1207 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC008626.1-201ENST00000604384 255 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC005609.2-201ENST00000623320 592 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 MIR3120-201ENST00000636555 81 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 SMG7-216ENST00000638826 219 ntTSL 2 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 AC126773.4-201ENST00000612545 3043 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 Z99129.4-201ENST00000624649 2435 ntBASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC6.88□□□□□ -1.31
LINC00346Q8IVM7 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 ZNF300P1-201ENST00000356555 1822 ntBASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 FADS2P1-201ENST00000611807 1446 ntBASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 AP000705.2-201ENST00000433524 1386 ntBASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LINC00346Q8IVM7 NPM1P46-201ENST00000399556 865 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms