Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 AC007614.2-201ENST00000569877 1851 ntBASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM48Q8IWZ4 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 MAPK10-279ENST00000641157 2449 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 Y_RNA.209-201ENST00000364156 111 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 OR1F12-201ENST00000402365 945 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 CCNYL3-201ENST00000407030 998 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC016734.1-201ENST00000436998 654 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC009022.1-201ENST00000472115 496 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 RN7SL272P-201ENST00000487762 289 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 OR4C9P-201ENST00000532368 925 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC009779.4-201ENST00000554248 611 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 TUBAP4-201ENST00000569261 416 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 MIR4682-201ENST00000580643 80 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC008507.2-201ENST00000588402 1176 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC245884.10-201ENST00000597355 337 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC099777.1-201ENST00000603779 1070 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 RN7SL820P-201ENST00000616437 299 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC020763.5-201ENST00000623298 430 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 MIR3120-201ENST00000636555 81 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 OR6C71P-202ENST00000641886 1107 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AC087501.5-201ENST00000607496 2374 ntBASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM48Q8IWZ4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 RPL3P4-201ENST00000417615 423 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 FAR1P1-201ENST00000427163 934 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AL354893.1-201ENST00000433735 348 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 RPS13P2-201ENST00000437890 455 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 AC068491.1-201ENST00000449539 1241 ntBASIC7.92□□□□□ -1.14
TRIM48Q8IWZ4 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms