Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 AL158206.1-201ENST00000563205 1965 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 CDY4P-201ENST00000418290 1513 ntBASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.19□□□□□ -1.1
FNDC3BQ53EP0 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AL139039.2-201ENST00000407436 479 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 PRPS1P2-201ENST00000430496 937 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 KRTAP9-11P-201ENST00000431013 525 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 GXYLT1P1-201ENST00000446657 490 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 RN7SL89P-201ENST00000480252 283 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 ATG10-AS1-201ENST00000504846 648 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 CASP12-211ENST00000508062 774 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC083906.4-201ENST00000514634 987 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 PVT1-214ENST00000522875 922 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 OR7E1P-201ENST00000533891 958 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 RBM22P13-201ENST00000569805 1244 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC006120.1-201ENST00000579375 546 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 NPM1P45-201ENST00000583151 559 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AL359742.1-201ENST00000622497 540 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 RHOXF1P2-201ENST00000635431 502 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 PSMC1P3-201ENST00000453822 1318 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AC020549.1-201ENST00000536916 1440 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AL133279.3-201ENST00000563140 2352 ntBASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
FNDC3BQ53EP0 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 ZNF300P1-201ENST00000356555 1822 ntBASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 BRD7P2-201ENST00000466133 1944 ntBASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 RN7SKP89-201ENST00000410774 242 ntBASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 PYHIN5P-201ENST00000431627 723 ntBASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AC013410.1-201ENST00000436223 1232 ntBASIC8.17□□□□□ -1.1
FNDC3BQ53EP0 AC239798.1-201ENST00000449024 1176 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms