Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC8.51□□□□□ -1.05
UBE4BO95155 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
UBE4BO95155 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.51□□□□□ -1.05
UBE4BO95155 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC8.51□□□□□ -1.05
UBE4BO95155 AC009948.5-201ENST00000624360 4406 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 OR9K2-201ENST00000305377 1122 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC8.51□□□□□ -1.05
UBE4BO95155 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
UBE4BO95155 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.51□□□□□ -1.05
UBE4BO95155 AL355375.1-201ENST00000405686 392 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 RPSAP72-201ENST00000407020 358 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.51□□□□□ -1.05
UBE4BO95155 AL591438.2-201ENST00000452635 691 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC8.51□□□□□ -1.05
UBE4BO95155 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
UBE4BO95155 AC109454.1-201ENST00000471205 498 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 AF186996.3-201ENST00000509527 964 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC8.51□□□□□ -1.05
UBE4BO95155 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.51□□□□□ -1.05
UBE4BO95155 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.51□□□□□ -1.05
UBE4BO95155 AC063923.2-201ENST00000562158 928 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC8.51□□□□□ -1.05
UBE4BO95155 MIR4437-201ENST00000581331 60 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 AC006557.4-201ENST00000585516 830 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 MIR6761-201ENST00000617899 72 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 MIR6723-201ENST00000621981 89 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.51□□□□□ -1.05
UBE4BO95155 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
UBE4BO95155 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
UBE4BO95155 MFSD8-227ENST00000641393 4069 ntBASIC8.51□□□□□ -1.05
UBE4BO95155 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.5□□□□□ -1.05
UBE4BO95155 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
UBE4BO95155 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC8.5□□□□□ -1.05
UBE4BO95155 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
UBE4BO95155 AL513523.1-201ENST00000417868 1309 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
UBE4BO95155 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.5□□□□□ -1.05
UBE4BO95155 AC092066.1-201ENST00000425131 317 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 FTH1P5-201ENST00000425761 545 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
UBE4BO95155 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.5□□□□□ -1.05
UBE4BO95155 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.5□□□□□ -1.05
UBE4BO95155 AC099344.1-201ENST00000433548 492 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 AL590682.1-201ENST00000437248 344 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC8.5□□□□□ -1.05
UBE4BO95155 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC8.5□□□□□ -1.05
UBE4BO95155 AC113352.1-201ENST00000513196 666 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.5□□□□□ -1.05
UBE4BO95155 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.5□□□□□ -1.05
UBE4BO95155 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.5□□□□□ -1.05
UBE4BO95155 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.5□□□□□ -1.05
UBE4BO95155 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 NPIPP1-203ENST00000547107 1071 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.5□□□□□ -1.05
UBE4BO95155 MIR3689F-201ENST00000579617 66 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 AC026367.2-201ENST00000610630 553 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 AC012488.1-201ENST00000611221 640 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC8.5□□□□□ -1.05
UBE4BO95155 AC079456.1-201ENST00000624010 480 ntBASIC8.5□□□□□ -1.05
UBE4BO95155 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
UBE4BO95155 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.49□□□□□ -1.05
UBE4BO95155 MAPK10-290ENST00000641237 2826 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 AC098657.2-201ENST00000567886 1976 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 AP000766.1-201ENST00000561746 4140 ntBASIC8.49□□□□□ -1.05
UBE4BO95155 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
UBE4BO95155 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.49□□□□□ -1.05
UBE4BO95155 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms