Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MRPS5P4-201ENST00000592830 325 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 AL021918.1-201ENST00000603933 236 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 AC008385.1-201ENST00000604421 355 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 AL589666.2-201ENST00000624603 618 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.32□□□□□ -1.08
MTHFRP42898 AC241377.2-202ENST00000636462 997 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 OR8A1-204ENST00000642111 1145 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
MTHFRP42898 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 OR51E1-202ENST00000530215 2942 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 AL162632.3-201ENST00000566976 1625 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 AC131392.2-201ENST00000505635 4332 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 GC-208ENST00000513476 1567 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 AL161742.1-201ENST00000418154 584 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 GAPDHP55-201ENST00000423136 803 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 AC022730.2-201ENST00000465359 452 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 RN7SL58P-201ENST00000473445 294 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 AC083906.4-201ENST00000514634 987 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC8.31□□□□□ -1.08
MTHFRP42898 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC8.31□□□□□ -1.08
MTHFRP42898 COX6CP11-201ENST00000555293 229 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 AC012181.2-201ENST00000570210 699 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 AC012488.1-201ENST00000611221 640 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 FAM27E3-202ENST00000614611 340 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
MTHFRP42898 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.31□□□□□ -1.08
MTHFRP42898 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 AC090983.1-201ENST00000623426 3897 ntBASIC8.31□□□□□ -1.08
MTHFRP42898 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
MTHFRP42898 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
MTHFRP42898 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
MTHFRP42898 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.3□□□□□ -1.08
MTHFRP42898 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.3□□□□□ -1.08
MTHFRP42898 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC8.3□□□□□ -1.08
MTHFRP42898 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
MTHFRP42898 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms