Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MTHFRP42898 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.34□□□□□ -1.07
MTHFRP42898 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MTHFRP42898 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MTHFRP42898 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC8.34□□□□□ -1.07
MTHFRP42898 AL133279.3-201ENST00000563140 2352 ntBASIC8.34□□□□□ -1.07
MTHFRP42898 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
MTHFRP42898 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC8.34□□□□□ -1.07
MTHFRP42898 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.34□□□□□ -1.07
MTHFRP42898 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.34□□□□□ -1.07
MTHFRP42898 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
MTHFRP42898 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.34□□□□□ -1.07
MTHFRP42898 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.34□□□□□ -1.07
MTHFRP42898 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
MTHFRP42898 TRIM51EP-201ENST00000524374 1516 ntBASIC8.34□□□□□ -1.08
MTHFRP42898 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
MTHFRP42898 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
MTHFRP42898 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC8.33□□□□□ -1.08
MTHFRP42898 HERC2P5-201ENST00000562687 3825 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 PACRG-AS2-201ENST00000418665 1300 ntTSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.33□□□□□ -1.08
MTHFRP42898 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 THAP12P1-201ENST00000398672 2203 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
MTHFRP42898 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
MTHFRP42898 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 MOSPD1-201ENST00000370777 784 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
MTHFRP42898 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 RPL12P27-201ENST00000414870 496 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.33□□□□□ -1.08
MTHFRP42898 AC231532.1-201ENST00000438584 312 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 AC239800.1-201ENST00000442049 719 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 PA2G4P1-201ENST00000442248 1197 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC8.33□□□□□ -1.08
MTHFRP42898 AL590326.1-201ENST00000460857 334 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 RPS3P7-201ENST00000488662 726 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 AC006070.1-201ENST00000508151 193 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 AL645924.2-201ENST00000508865 900 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.33□□□□□ -1.08
MTHFRP42898 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 AL049869.4-201ENST00000555669 178 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 AC090415.1-201ENST00000581877 847 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 Z93930.3-201ENST00000607919 749 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 TUG1_3.1-201ENST00000616187 237 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 AC244100.4-201ENST00000617747 388 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.33□□□□□ -1.08
MTHFRP42898 ABCA17P-204ENST00000494925 3478 ntBASIC8.33□□□□□ -1.08
MTHFRP42898 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.33□□□□□ -1.08
MTHFRP42898 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
MTHFRP42898 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 THAP12P6-201ENST00000431978 2310 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 HSPD1P4-201ENST00000547203 1702 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 RN7SKP23-201ENST00000625159 4301 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 RN7SKP50-201ENST00000364694 315 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 GAPDHP32-201ENST00000433816 998 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.32□□□□□ -1.08
MTHFRP42898 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC8.32□□□□□ -1.08
MTHFRP42898 RN7SL416P-201ENST00000494042 298 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC8.32□□□□□ -1.08
MTHFRP42898 IGKV1D-32-201ENST00000517449 318 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 OR7E2P-201ENST00000533071 889 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 MRPL40P1-201ENST00000542687 604 ntBASIC8.32□□□□□ -1.08
MTHFRP42898 DCN-207ENST00000546370 586 ntTSL 3 BASIC8.32□□□□□ -1.08
MTHFRP42898 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.32□□□□□ -1.08
MTHFRP42898 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.32□□□□□ -1.08
MTHFRP42898 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MTHFRP42898 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.32□□□□□ -1.08
MTHFRP42898 RPL23AP77-201ENST00000588044 463 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms