Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCN10AQ9Y5Y9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
SCN10AQ9Y5Y9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCN10AQ9Y5Y9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
SCN10AQ9Y5Y9 AL024507.2-201ENST00000606070 2574 ntBASIC22.27■■□□□ 1.16
SCN10AQ9Y5Y9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SCN10AQ9Y5Y9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
SCN10AQ9Y5Y9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 AL445228.2-201ENST00000605589 952 ntBASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 AC079598.2-202ENST00000546624 1451 ntBASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
SCN10AQ9Y5Y9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 RBM17P1-201ENST00000453646 1190 ntBASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCN10AQ9Y5Y9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 AL355355.2-201ENST00000442321 338 ntBASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 NIFKP9-201ENST00000419265 221 ntBASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 AC116562.2-201ENST00000507042 360 ntBASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.25■■□□□ 1.15
SCN10AQ9Y5Y9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCN10AQ9Y5Y9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 TMPOP1-202ENST00000424642 1267 ntBASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 AC145285.6-201ENST00000604632 637 ntBASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 AL031963.3-201ENST00000606441 850 ntBASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 AC004264.1-201ENST00000608354 794 ntBASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCN10AQ9Y5Y9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCN10AQ9Y5Y9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
SCN10AQ9Y5Y9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.22■■□□□ 1.15
SCN10AQ9Y5Y9 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.22■■□□□ 1.15
SCN10AQ9Y5Y9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.22■■□□□ 1.15
SCN10AQ9Y5Y9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.22■■□□□ 1.15
SCN10AQ9Y5Y9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCN10AQ9Y5Y9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 MMP23A-201ENST00000234610 1017 ntBASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 UNC93B2-201ENST00000285383 730 ntBASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 AL390955.1-201ENST00000428694 934 ntBASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms