Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 AC073508.3-201ENST00000619697 1419 ntBASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 SLC25A3P1-201ENST00000443844 931 ntBASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
CDC42BPBQ9Y5S2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 AC233723.2-201ENST00000623798 2106 ntBASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDC42BPBQ9Y5S2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC30.74■■■□□ 2.51
CDC42BPBQ9Y5S2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 C1QL1P1-201ENST00000568105 661 ntBASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 MIR1238-201ENST00000408483 83 ntBASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CDC42BPBQ9Y5S2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC30.72■■■□□ 2.51
CDC42BPBQ9Y5S2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 AC004264.1-201ENST00000608354 794 ntBASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CDC42BPBQ9Y5S2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 KSR1P1-201ENST00000446298 240 ntBASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 AP002982.1-201ENST00000492365 877 ntBASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDC42BPBQ9Y5S2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CDC42BPBQ9Y5S2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 LINC01568-207ENST00000641790 1380 ntBASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 FITM1-202ENST00000559294 800 ntBASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDC42BPBQ9Y5S2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDC42BPBQ9Y5S2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.68■■■□□ 2.5
CDC42BPBQ9Y5S2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC30.68■■■□□ 2.5
CDC42BPBQ9Y5S2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms