Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 AC116050.2-201ENST00000612102 1779 ntBASIC19.55■□□□□ 0.72
PCDHGA3Q9Y5H0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 C1QBPP2-201ENST00000528754 825 ntBASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 SOX15-203ENST00000570788 1093 ntBASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA3Q9Y5H0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 FAM197Y4-202ENST00000622692 608 ntBASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA3Q9Y5H0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 AC069544.1-201ENST00000609399 999 ntBASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA3Q9Y5H0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms