Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGC4Q9Y5F7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGC4Q9Y5F7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 RNA5SP413-201ENST00000516373 109 ntBASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGC4Q9Y5F7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 HLA-B-256ENST00000639848 1089 ntBASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 GABARAPL3-202ENST00000624044 1851 ntBASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGC4Q9Y5F7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 AL512408.1-201ENST00000569378 2000 ntBASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGC4Q9Y5F7 PTBP1P-201ENST00000554374 1601 ntBASIC20.33■□□□□ 0.84
PCDHGC4Q9Y5F7 AC092368.3-202ENST00000574180 1591 ntBASIC20.33■□□□□ 0.84
PCDHGC4Q9Y5F7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHGC4Q9Y5F7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGC4Q9Y5F7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms