Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 TMEM179-206ENST00000616017 1645 ntBASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 BX119927.1-201ENST00000636596 1552 ntBASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 KRT18P14-201ENST00000534205 1250 ntBASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF6Q9Y4K3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 CDV3P1-201ENST00000471403 739 ntBASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF6Q9Y4K3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF6Q9Y4K3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF6Q9Y4K3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAF6Q9Y4K3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAF6Q9Y4K3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF6Q9Y4K3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF6Q9Y4K3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 AC087289.5-201ENST00000586076 3175 ntBASIC19.58■□□□□ 0.72
TRAF6Q9Y4K3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF6Q9Y4K3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms