Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 AC098590.1-201ENST00000468126 897 ntBASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 AC092720.2-201ENST00000602388 1665 ntBASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 AL137060.1-201ENST00000618151 2648 ntBASIC21.68■■□□□ 1.06
UBQLN1Q9UMX0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 HLA-G-202ENST00000376815 851 ntBASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 HLA-G-203ENST00000376818 1127 ntBASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN1Q9UMX0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 GCSHP5-201ENST00000443090 522 ntBASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 AC233263.1-201ENST00000578059 224 ntBASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 AL031963.3-201ENST00000606441 850 ntBASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN1Q9UMX0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 DPP3P2-201ENST00000416030 1696 ntBASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
UBQLN1Q9UMX0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.64■■□□□ 1.06
UBQLN1Q9UMX0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN1Q9UMX0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN1Q9UMX0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.64■■□□□ 1.06
UBQLN1Q9UMX0 KRT8P20-201ENST00000423953 1409 ntBASIC21.64■■□□□ 1.06
UBQLN1Q9UMX0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN1Q9UMX0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 AC142381.4-202ENST00000563973 229 ntBASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 RN7SL471P-201ENST00000580476 299 ntBASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN1Q9UMX0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN1Q9UMX0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms