Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.37■□□□□ 0.37
TREM2Q9NZC2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TREM2Q9NZC2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TREM2Q9NZC2 AL157384.1-201ENST00000445995 2473 ntBASIC17.37■□□□□ 0.37
TREM2Q9NZC2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TREM2Q9NZC2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TREM2Q9NZC2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 LSM12P1-201ENST00000411836 588 ntBASIC17.36■□□□□ 0.37
TREM2Q9NZC2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 RNA5SP413-201ENST00000516373 109 ntBASIC17.36■□□□□ 0.37
TREM2Q9NZC2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 AC011484.1-201ENST00000377652 1995 ntBASIC17.36■□□□□ 0.37
TREM2Q9NZC2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TREM2Q9NZC2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 AP005212.1-201ENST00000581547 1997 ntBASIC17.35■□□□□ 0.37
TREM2Q9NZC2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 FAM201B-201ENST00000458407 597 ntBASIC17.35■□□□□ 0.37
TREM2Q9NZC2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 AC092118.2-201ENST00000613495 667 ntBASIC17.35■□□□□ 0.37
TREM2Q9NZC2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREM2Q9NZC2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 LINC01006-201ENST00000333319 2292 ntBASIC17.34■□□□□ 0.37
TREM2Q9NZC2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 CYP2T3P-201ENST00000601990 817 ntBASIC17.34■□□□□ 0.37
TREM2Q9NZC2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREM2Q9NZC2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.33■□□□□ 0.37
TREM2Q9NZC2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREM2Q9NZC2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.33■□□□□ 0.37
TREM2Q9NZC2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREM2Q9NZC2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREM2Q9NZC2 AC007225.1-201ENST00000566331 1836 ntBASIC17.33■□□□□ 0.37
TREM2Q9NZC2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREM2Q9NZC2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TREM2Q9NZC2 CYP21A1P-202ENST00000354927 1481 ntBASIC17.33■□□□□ 0.37
TREM2Q9NZC2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.33■□□□□ 0.36
TREM2Q9NZC2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TREM2Q9NZC2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TREM2Q9NZC2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms