Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HPF1Q9NWY4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 PNMA6B-201ENST00000538162 1200 ntBASIC18.68■□□□□ 0.58
HPF1Q9NWY4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 MIR2861-201ENST00000636310 90 ntBASIC18.68■□□□□ 0.58
HPF1Q9NWY4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HPF1Q9NWY4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 KRT18P29-201ENST00000397031 1267 ntBASIC18.67■□□□□ 0.58
HPF1Q9NWY4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 AP003097.1-201ENST00000530657 1135 ntBASIC18.67■□□□□ 0.58
HPF1Q9NWY4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPF1Q9NWY4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 AC026366.1-201ENST00000488803 879 ntBASIC18.66■□□□□ 0.58
HPF1Q9NWY4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 ITM2C-210ENST00000620962 501 ntBASIC18.66■□□□□ 0.58
HPF1Q9NWY4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPF1Q9NWY4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.65■□□□□ 0.58
HPF1Q9NWY4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HPF1Q9NWY4 KRT8P36-201ENST00000489121 1440 ntBASIC18.65■□□□□ 0.58
HPF1Q9NWY4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HPF1Q9NWY4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.64■□□□□ 0.58
HPF1Q9NWY4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.64■□□□□ 0.58
HPF1Q9NWY4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HPF1Q9NWY4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.64■□□□□ 0.57
HPF1Q9NWY4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms