Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PARPBPQ9NWS1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PARPBPQ9NWS1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
PARPBPQ9NWS1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PARPBPQ9NWS1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PARPBPQ9NWS1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 DUSP5P2-201ENST00000426873 1033 ntBASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 AC091874.3-201ENST00000512672 1195 ntBASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 C2orf69P4-201ENST00000565394 541 ntBASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PARPBPQ9NWS1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
PARPBPQ9NWS1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms