Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 AL162377.1-201ENST00000618844 1793 ntBASIC19.07■□□□□ 0.64
EXD2Q9NVH0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 AC091799.1-201ENST00000422823 811 ntBASIC19.07■□□□□ 0.64
EXD2Q9NVH0 AC007322.3-201ENST00000426526 701 ntBASIC19.07■□□□□ 0.64
EXD2Q9NVH0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 UBE2DNL-204ENST00000602536 740 ntBASIC19.07■□□□□ 0.64
EXD2Q9NVH0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXD2Q9NVH0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 CDV3P1-201ENST00000471403 739 ntBASIC19.06■□□□□ 0.64
EXD2Q9NVH0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 MYCNOS-205ENST00000641950 531 ntBASIC19.06■□□□□ 0.64
EXD2Q9NVH0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXD2Q9NVH0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 KRT18P61-201ENST00000585825 1298 ntBASIC19.05■□□□□ 0.64
EXD2Q9NVH0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 AC099778.1-201ENST00000568593 1911 ntBASIC19.05■□□□□ 0.64
EXD2Q9NVH0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.05■□□□□ 0.64
EXD2Q9NVH0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 MIR2861-201ENST00000636310 90 ntBASIC19.04■□□□□ 0.64
EXD2Q9NVH0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 AC092720.2-201ENST00000602388 1665 ntBASIC19.04■□□□□ 0.64
EXD2Q9NVH0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.04■□□□□ 0.64
EXD2Q9NVH0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EXD2Q9NVH0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
EXD2Q9NVH0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EXD2Q9NVH0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.03■□□□□ 0.64
EXD2Q9NVH0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms