Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.88■□□□□ 0.13
SMCO4Q9NRQ5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 AC093536.1-201ENST00000569153 554 ntBASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 LINC01465-201ENST00000408887 1940 ntBASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMCO4Q9NRQ5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 AC104581.1-202ENST00000635932 2618 ntBASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 AC009113.1-201ENST00000570267 2443 ntBASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMCO4Q9NRQ5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 AC004687.1-201ENST00000579003 1625 ntBASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMCO4Q9NRQ5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.84■□□□□ 0.13
SMCO4Q9NRQ5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms