Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC007322.1-201ENST00000426983 750 ntBASIC18.72■□□□□ 0.59
POLE3Q9NRF9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.72■□□□□ 0.59
POLE3Q9NRF9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 AC022517.1-201ENST00000592429 346 ntBASIC18.71■□□□□ 0.59
POLE3Q9NRF9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 AC008694.1-202ENST00000636953 945 ntBASIC18.71■□□□□ 0.59
POLE3Q9NRF9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLE3Q9NRF9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.71■□□□□ 0.58
POLE3Q9NRF9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLE3Q9NRF9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 CYP2T1P-201ENST00000432607 1285 ntBASIC18.69■□□□□ 0.58
POLE3Q9NRF9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 OR10C1-204ENST00000622521 1039 ntBASIC18.69■□□□□ 0.58
POLE3Q9NRF9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLE3Q9NRF9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 AC099778.1-201ENST00000568593 1911 ntBASIC18.68■□□□□ 0.58
POLE3Q9NRF9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms