Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 AC026310.3-201ENST00000625186 2373 ntBASIC20.66■□□□□ 0.9
SPHK2Q9NRA0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 AC124283.5-201ENST00000624661 1809 ntBASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 PTBP1P-201ENST00000554374 1601 ntBASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 AC012618.2-201ENST00000428058 849 ntBASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
SPHK2Q9NRA0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPHK2Q9NRA0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHK2Q9NRA0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHK2Q9NRA0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPHK2Q9NRA0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SPHK2Q9NRA0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 HLA-G-202ENST00000376815 851 ntBASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 HLA-G-203ENST00000376818 1127 ntBASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 RPS2P55-201ENST00000397318 883 ntBASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 SNORA78-201ENST00000459373 127 ntBASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 AC107956.1-201ENST00000494359 873 ntBASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 AC233702.5-201ENST00000584107 538 ntBASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPHK2Q9NRA0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 FP700111.2-201ENST00000619190 1892 ntBASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 AC006128.1-201ENST00000624704 1661 ntBASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPHK2Q9NRA0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPHK2Q9NRA0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPHK2Q9NRA0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms