Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 AC066615.1-201ENST00000640911 628 ntBASIC18.91■□□□□ 0.62
KLHL1Q9NR64 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
KLHL1Q9NR64 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.9■□□□□ 0.62
KLHL1Q9NR64 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 MCRIP2P1-201ENST00000394346 511 ntBASIC18.9■□□□□ 0.62
KLHL1Q9NR64 ESRRAP1-201ENST00000400596 1257 ntBASIC18.9■□□□□ 0.62
KLHL1Q9NR64 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 AC100791.3-201ENST00000617619 330 ntBASIC18.9■□□□□ 0.62
KLHL1Q9NR64 ITM2C-210ENST00000620962 501 ntBASIC18.9■□□□□ 0.62
KLHL1Q9NR64 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KLHL1Q9NR64 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
KLHL1Q9NR64 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KLHL1Q9NR64 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KLHL1Q9NR64 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KLHL1Q9NR64 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 AC008687.6-201ENST00000596318 630 ntBASIC18.89■□□□□ 0.61
KLHL1Q9NR64 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KLHL1Q9NR64 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 LINC01521-201ENST00000504184 1943 ntBASIC18.88■□□□□ 0.61
KLHL1Q9NR64 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 AL589743.5-201ENST00000616611 1050 ntBASIC18.88■□□□□ 0.61
KLHL1Q9NR64 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KLHL1Q9NR64 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHL1Q9NR64 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms