Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 AC231657.2-201ENST00000624556 255 ntBASIC21.25■□□□□ 0.99
GDF3Q9NR23 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
GDF3Q9NR23 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF3Q9NR23 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
GDF3Q9NR23 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF3Q9NR23 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 UBE2DNL-204ENST00000602536 740 ntBASIC21.23■□□□□ 0.99
GDF3Q9NR23 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDF3Q9NR23 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF3Q9NR23 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF3Q9NR23 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF3Q9NR23 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
GDF3Q9NR23 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GDF3Q9NR23 AC007322.1-201ENST00000426983 750 ntBASIC21.22■□□□□ 0.99
GDF3Q9NR23 AP001160.3-201ENST00000601484 763 ntBASIC21.22■□□□□ 0.99
GDF3Q9NR23 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.22■□□□□ 0.99
GDF3Q9NR23 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF3Q9NR23 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.22■□□□□ 0.99
GDF3Q9NR23 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF3Q9NR23 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
GDF3Q9NR23 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GDF3Q9NR23 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDF3Q9NR23 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF3Q9NR23 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.21■□□□□ 0.99
GDF3Q9NR23 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF3Q9NR23 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF3Q9NR23 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF3Q9NR23 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 AL121832.2-201ENST00000610979 668 ntBASIC21.21■□□□□ 0.99
GDF3Q9NR23 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
GDF3Q9NR23 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDF3Q9NR23 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
GDF3Q9NR23 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
GDF3Q9NR23 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDF3Q9NR23 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms