Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.89■□□□□ 0.93
HPS4Q9NQG7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 AC107956.1-201ENST00000494359 873 ntBASIC20.89■□□□□ 0.93
HPS4Q9NQG7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 AC073912.3-201ENST00000624414 853 ntBASIC20.89■□□□□ 0.93
HPS4Q9NQG7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 AL390719.1-204ENST00000412397 1219 ntBASIC20.88■□□□□ 0.93
HPS4Q9NQG7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 AC011484.1-201ENST00000377652 1995 ntBASIC20.88■□□□□ 0.93
HPS4Q9NQG7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.88■□□□□ 0.93
HPS4Q9NQG7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 KRASP1-201ENST00000407852 552 ntBASIC20.87■□□□□ 0.93
HPS4Q9NQG7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HPS4Q9NQG7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 AL137060.1-201ENST00000618151 2648 ntBASIC20.86■□□□□ 0.93
HPS4Q9NQG7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 TSPY7P-201ENST00000431358 1114 ntBASIC20.86■□□□□ 0.93
HPS4Q9NQG7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 AC110285.5-201ENST00000611501 352 ntBASIC20.86■□□□□ 0.93
HPS4Q9NQG7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPS4Q9NQG7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 ECEL1P3-201ENST00000427961 737 ntBASIC20.85■□□□□ 0.93
HPS4Q9NQG7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.85■□□□□ 0.93
HPS4Q9NQG7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPS4Q9NQG7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms