Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKKSQ9NPJ1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKKSQ9NPJ1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.08■□□□□ 0.64
MKKSQ9NPJ1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.08■□□□□ 0.64
MKKSQ9NPJ1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKKSQ9NPJ1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MKKSQ9NPJ1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.07■□□□□ 0.64
MKKSQ9NPJ1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 KRT18P29-201ENST00000397031 1267 ntBASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 UNC93B4-201ENST00000505679 747 ntBASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MKKSQ9NPJ1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MKKSQ9NPJ1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 AL390719.1-204ENST00000412397 1219 ntBASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MKKSQ9NPJ1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms