Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LYRM4Q9HD34 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19■□□□□ 0.63
LYRM4Q9HD34 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19■□□□□ 0.63
LYRM4Q9HD34 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYRM4Q9HD34 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 AL031963.3-201ENST00000606441 850 ntBASIC18.99■□□□□ 0.63
LYRM4Q9HD34 AC083880.1-201ENST00000608266 535 ntBASIC18.99■□□□□ 0.63
LYRM4Q9HD34 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYRM4Q9HD34 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 HLA-G-202ENST00000376815 851 ntBASIC18.98■□□□□ 0.63
LYRM4Q9HD34 HLA-G-203ENST00000376818 1127 ntBASIC18.98■□□□□ 0.63
LYRM4Q9HD34 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 KRT8P20-201ENST00000423953 1409 ntBASIC18.98■□□□□ 0.63
LYRM4Q9HD34 KRT8P17-201ENST00000453110 1448 ntBASIC18.98■□□□□ 0.63
LYRM4Q9HD34 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYRM4Q9HD34 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 HLA-B-256ENST00000639848 1089 ntBASIC18.97■□□□□ 0.63
LYRM4Q9HD34 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYRM4Q9HD34 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYRM4Q9HD34 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYRM4Q9HD34 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms