Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE1Q9HBF4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZFYVE1Q9HBF4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
ZFYVE1Q9HBF4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 DPP3P2-201ENST00000416030 1696 ntBASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZFYVE1Q9HBF4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 LINC01006-201ENST00000333319 2292 ntBASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 AC083880.1-201ENST00000608266 535 ntBASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 AC092667.1-201ENST00000434301 2586 ntBASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZFYVE1Q9HBF4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZFYVE1Q9HBF4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZFYVE1Q9HBF4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 SMG8-203ENST00000578922 2178 ntBASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.16■□□□□ 0.82
ZFYVE1Q9HBF4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms